STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG00223.1Two-component system, LytT family, sensor kinase. (438 aa)    
Predicted Functional Partners:
SFG00247.1
Two component transcriptional regulator, LytTR family.
 0.990
SFG39244.1
Two component transcriptional regulator, LytTR family.
 0.956
SFG35692.1
Two component transcriptional regulator, LytTR family.
 0.954
SFG22196.1
Two component transcriptional regulator, LytTR family.
 0.952
SFG15371.1
Two component transcriptional regulator, LytTR family.
 0.939
SFG82298.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
  
  0.924
SFG39270.1
Two-component system, LytT family, sensor histidine kinase LytS.
  
  
 
0.867
SFG09912.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
0.756
SFG78285.1
Histidine kinase.
 
  
0.743
SFG78307.1
Two-component system, response regulator YesN.
  
 0.676
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.