STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG06542.1Fe-S oxidoreductase. (460 aa)    
Predicted Functional Partners:
SFG12404.1
Iron-sulfur cluster-binding protein.
 
 0.967
SFG79217.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.848
SFG87939.1
Nitrate reductase gamma subunit.
 
 
 0.842
SFG88116.1
Dissimilatory sulfite reductase alpha subunit.
 
 
 0.839
SFG88096.1
Dissimilatory sulfite reductase beta subunit.
 
 
 0.834
SFG26499.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.817
SFG87896.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.817
SFH14756.1
tRNA 2-thiouridine synthesizing protein E.
 
 
 
 0.816
SFG26736.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoB.
 
  
 0.812
SFG26675.1
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
 
 
 0.810
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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