STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG06566.1LuxR family transcriptional regulator, maltose regulon positive regulatory protein. (503 aa)    
Predicted Functional Partners:
SFG76143.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.693
SFG88283.1
Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.693
SFG88742.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.693
SFG06584.1
Hypothetical protein.
       0.506
SFH15134.1
Hypothetical protein.
  
     0.482
SFH12254.1
dGTPase; Belongs to the dGTPase family. Type 2 subfamily.
 
  
  0.435
SFH07394.1
Predicted ATPase.
    
 0.424
SFH12161.1
Predicted ATPase.
     
 0.424
SFG06611.1
Phage Tail Collar Domain.
       0.421
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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