STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG07171.1Putative peptidoglycan binding domain-containing protein. (193 aa)    
Predicted Functional Partners:
SFG07151.1
YvrJ protein family protein.
       0.789
SFG50764.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SFG68749.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SFH18430.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SFH25340.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SFH37600.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SFH37616.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SFG07106.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
       0.458
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.