STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG08152.1Alcohol dehydrogenase. (390 aa)    
Predicted Functional Partners:
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
   
 0.774
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.774
SFG70918.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
0.763
SFG08180.1
Spore germination protein KC.
       0.689
SFG08207.1
Spore germination protein (amino acid permease).
       0.689
SFH17037.1
Coenzyme A transferase.
  
 
 0.689
SFF93463.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.681
SFH14559.1
Threonine dehydrogenase.
  
 
 0.670
SFG25820.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.659
SFH02971.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.638
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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