STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG10048.1Glycolate oxidase. (456 aa)    
Predicted Functional Partners:
SFG10071.1
Glycolate oxidase iron-sulfur subunit.
 
 0.998
SFG12683.1
Glycolate oxidase iron-sulfur subunit.
 
 0.995
SFG46764.1
Electron transfer flavoprotein beta subunit.
  
 
 0.902
SFG46742.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.887
SFH00831.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.887
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
 0.884
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.851
SFG00594.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.832
SFG12482.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
  
 0.826
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.826
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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