STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG11156.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
SFG98302.1
Protoporphyrin IX magnesium-chelatase.
    
 0.804
SFH12906.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.700
SFG15496.1
Cobaltochelatase CobN.
     
 0.621
SFG11182.1
Transcriptional regulator, MarR family.
 
     0.558
SFG01835.1
uroporphyrinogen-III synthase.
     
 0.527
SFG98332.1
Protoporphyrin IX magnesium-chelatase.
     
 0.526
SFG12920.1
Putative efflux protein, MATE family.
 
     0.516
SFG93621.1
4Fe-4S single cluster domain-containing protein.
  
   
 0.462
SFF92980.1
Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
    0.459
SFH34155.1
Type IV leader peptidase family protein.
   
    0.459
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.