Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG11962.1 | SFG11987.1 | SAMN05660649_00750 | SAMN05660649_00751 | Two-component system, NtrC family, response regulator AtoC. | PAS domain S-box-containing protein. | 0.956 |
SFG11962.1 | SFG12012.1 | SAMN05660649_00750 | SAMN05660649_00752 | Two-component system, NtrC family, response regulator AtoC. | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.732 |
SFG11962.1 | SFG12028.1 | SAMN05660649_00750 | SAMN05660649_00753 | Two-component system, NtrC family, response regulator AtoC. | Hypothetical protein. | 0.603 |
SFG11962.1 | SFH07394.1 | SAMN05660649_00750 | SAMN05660649_03763 | Two-component system, NtrC family, response regulator AtoC. | Predicted ATPase. | 0.970 |
SFG11962.1 | SFH12161.1 | SAMN05660649_00750 | SAMN05660649_03941 | Two-component system, NtrC family, response regulator AtoC. | Predicted ATPase. | 0.970 |
SFG11962.1 | pxpA | SAMN05660649_00750 | SAMN05660649_00749 | Two-component system, NtrC family, response regulator AtoC. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.426 |
SFG11987.1 | SFG11962.1 | SAMN05660649_00751 | SAMN05660649_00750 | PAS domain S-box-containing protein. | Two-component system, NtrC family, response regulator AtoC. | 0.956 |
SFG11987.1 | SFG12012.1 | SAMN05660649_00751 | SAMN05660649_00752 | PAS domain S-box-containing protein. | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.746 |
SFG11987.1 | SFG12028.1 | SAMN05660649_00751 | SAMN05660649_00753 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.603 |
SFG11987.1 | SFH07394.1 | SAMN05660649_00751 | SAMN05660649_03763 | PAS domain S-box-containing protein. | Predicted ATPase. | 0.978 |
SFG11987.1 | SFH12161.1 | SAMN05660649_00751 | SAMN05660649_03941 | PAS domain S-box-containing protein. | Predicted ATPase. | 0.975 |
SFG11987.1 | pxpA | SAMN05660649_00751 | SAMN05660649_00749 | PAS domain S-box-containing protein. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.466 |
SFG12012.1 | SFG11962.1 | SAMN05660649_00752 | SAMN05660649_00750 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Two-component system, NtrC family, response regulator AtoC. | 0.732 |
SFG12012.1 | SFG11987.1 | SAMN05660649_00752 | SAMN05660649_00751 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | PAS domain S-box-containing protein. | 0.746 |
SFG12012.1 | SFG12028.1 | SAMN05660649_00752 | SAMN05660649_00753 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Hypothetical protein. | 0.773 |
SFG12012.1 | SFG12404.1 | SAMN05660649_00752 | SAMN05660649_00771 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Iron-sulfur cluster-binding protein. | 0.587 |
SFG12012.1 | SFG72234.1 | SAMN05660649_00752 | SAMN05660649_02508 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Carbon starvation protein. | 0.612 |
SFG12012.1 | SFG93640.1 | SAMN05660649_00752 | SAMN05660649_03215 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | L-proline dehydrogenase. | 0.739 |
SFG12012.1 | SFH02674.1 | SAMN05660649_00752 | SAMN05660649_03551 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | neurotransmitter:Na+ symporter, NSS family. | 0.620 |
SFG12012.1 | SFH07394.1 | SAMN05660649_00752 | SAMN05660649_03763 | solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Predicted ATPase. | 0.745 |
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