STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG12640.1Aldehyde:ferredoxin oxidoreductase. (572 aa)    
Predicted Functional Partners:
SFH02717.1
Fe-S-cluster-containing hydrogenase component 2.
 
 0.902
SFF98213.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
  
 0.773
SFG22891.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
  
 0.773
SFG58429.1
Formate dehydrogenase iron-sulfur subunit.
  
 0.771
SFG70024.1
Formate dehydrogenase iron-sulfur subunit.
  
 0.771
SFH30019.1
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.759
SFG84014.1
Tungstate transport system substrate-binding protein.
 
   
 0.752
SFG72683.1
4Fe-4S binding domain-containing protein.
   
 
 0.712
SFG72706.1
Sarcosine oxidase subunit alpha.
   
 
 0.712
SFG21595.1
4Fe-4S binding domain-containing protein.
   
 
 0.711
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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