STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG14155.1Citrate lyase beta subunit. (395 aa)    
Predicted Functional Partners:
SFG14133.1
TRSP domain C terminus to PRTase_2.
 
   
 0.969
SFG14110.1
PELOTA RNA binding domain-containing protein.
 
   
 0.932
SFG14076.1
Hypothetical protein.
 
     0.915
SFF93463.1
Oxaloacetate decarboxylase, alpha subunit.
  
 
 0.900
SFG14197.1
Tellurium resistance protein TerD.
 
   
 0.895
SFG14220.1
Stress response protein SCP2.
 
   
 0.887
SFG14242.1
Tellurium resistance protein TerD.
 
   
 0.861
SFG14469.1
Putative component of 'biosynthetic module'.
 
   
 0.839
SFG14175.1
Integral membrane protein, YkoY family.
 
     0.826
SFG39784.1
L-fuculose-phosphate aldolase.
   
    0.817
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.