STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG15371.1Two component transcriptional regulator, LytTR family. (246 aa)    
Predicted Functional Partners:
SFG00223.1
Two-component system, LytT family, sensor kinase.
 0.939
SFG39270.1
Two-component system, LytT family, sensor histidine kinase LytS.
 0.938
SFG09912.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.906
SFG78285.1
Histidine kinase.
 
 0.904
SFG15343.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
  
 0.895
SFG82502.1
Signal transduction histidine kinase.
  
 0.873
SFG58519.1
Methyl-accepting chemotaxis protein.
 
  
 0.703
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.685
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.676
SFH07394.1
Predicted ATPase.
    
 0.671
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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