STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG15575.1ABC-2 type transport system permease protein. (392 aa)    
Predicted Functional Partners:
SFG15628.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.937
SFG15655.1
HlyD family secretion protein.
 
  
 0.908
SFG71121.1
ABC-2 type transport system ATP-binding protein.
 
 0.887
SFG71164.1
ABC-2 type transport system ATP-binding protein.
 
 0.886
SFG71188.1
HlyD family secretion protein.
 
  
 0.803
SFG15603.1
ABC-2 type transport system permease protein.
 
    
0.776
SFG15680.1
Transcriptional regulator, TetR family.
 
     0.734
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
  
 0.685
SFH06942.1
ABC-2 type transport system permease protein.
    
  0.631
SFG55964.1
ABC-2 type transport system ATP-binding protein.
 
 0.628
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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