STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG16809.1Protein of unknown function. (169 aa)    
Predicted Functional Partners:
SFG16834.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.952
SFG08984.1
Putative ABC transport system permease protein.
   
 
 0.826
SFG22780.1
Putative ABC transport system permease protein.
   
 
 0.785
SFG35195.1
Putative ABC transport system permease protein.
   
 
 0.785
SFG54885.1
Putative ABC transport system permease protein.
   
 
 0.785
SFG62910.1
Putative ABC transport system permease protein.
   
 
 0.785
SFF93018.1
Putative ABC transport system ATP-binding protein.
   
 
 0.766
SFG08961.1
Putative ABC transport system ATP-binding protein.
   
 
 0.766
SFG22805.1
Putative ABC transport system ATP-binding protein.
   
 
 0.766
SFG35224.1
Putative ABC transport system ATP-binding protein.
   
 
 0.766
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.