STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG21568.1Sarcosine oxidase subunit alpha. (357 aa)    
Predicted Functional Partners:
SFG21546.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
 0.996
SFG21595.1
4Fe-4S binding domain-containing protein.
     0.995
SFG21643.1
Sarcosine oxidase subunit beta.
  
 0.994
SFG72726.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
  0.990
SFG72634.1
Sarcosine oxidase subunit beta.
  
 0.989
SFG72683.1
4Fe-4S binding domain-containing protein.
     0.983
SFG21622.1
Bacterioferritin-associated ferredoxin.
 
  
  0.962
SFH31920.1
Sarcosine oxidase subunit beta.
 
  
 0.961
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
 
   
 0.918
gcvPA
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
     
 0.861
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.