STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG22655.1LexA-binding, inner membrane-associated putative hydrolase. (177 aa)    
Predicted Functional Partners:
SFG22682.1
Hypothetical protein.
       0.697
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
       0.605
SFG22705.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
       0.519
SFH21954.1
DNA (cytosine-5)-methyltransferase 1.
   
    0.518
SFH28812.1
DNA (cytosine-5)-methyltransferase 1.
   
    0.518
SFH36943.1
DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
    0.518
SFH39330.1
DNA (cytosine-5)-methyltransferase 1.
   
    0.518
SFG62177.1
Protein of unknown function.
   
    0.485
SFG22606.1
Membrane protein involved in the export of O-antigen and teichoic acid.
     
 0.468
SFG22737.1
Mannose-1-phosphate guanylyltransferase.
       0.459
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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