Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF96026.1 | SFG22967.1 | SAMN05660649_00212 | SAMN05660649_01047 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein. | 0.686 |
SFF96026.1 | SFH06543.1 | SAMN05660649_00212 | SAMN05660649_03704 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Copper amine oxidase N-terminal domain-containing protein. | 0.686 |
SFF96026.1 | SFH06570.1 | SAMN05660649_00212 | SAMN05660649_03706 | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Copper amine oxidase N-terminal domain-containing protein. | 0.686 |
SFG22967.1 | SFF96026.1 | SAMN05660649_01047 | SAMN05660649_00212 | Hypothetical protein. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.686 |
SFG22967.1 | SFG48584.1 | SAMN05660649_01047 | SAMN05660649_01799 | Hypothetical protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.682 |
SFG22967.1 | SFG65752.1 | SAMN05660649_01047 | SAMN05660649_02324 | Hypothetical protein. | Uridine kinase. | 0.466 |
SFG22967.1 | SFH06543.1 | SAMN05660649_01047 | SAMN05660649_03704 | Hypothetical protein. | Copper amine oxidase N-terminal domain-containing protein. | 0.537 |
SFG22967.1 | SFH06570.1 | SAMN05660649_01047 | SAMN05660649_03706 | Hypothetical protein. | Copper amine oxidase N-terminal domain-containing protein. | 0.527 |
SFG22967.1 | cinA | SAMN05660649_01047 | SAMN05660649_04420 | Hypothetical protein. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.682 |
SFG22967.1 | guaA | SAMN05660649_01047 | SAMN05660649_00236 | Hypothetical protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.746 |
SFG22967.1 | guaB | SAMN05660649_01047 | SAMN05660649_01776 | Hypothetical protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.680 |
SFG22967.1 | rnpA | SAMN05660649_01047 | SAMN05660649_03115 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.613 |
SFG22967.1 | xpt | SAMN05660649_01047 | SAMN05660649_00461 | Hypothetical protein. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.469 |
SFG48584.1 | SFG22967.1 | SAMN05660649_01799 | SAMN05660649_01047 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Hypothetical protein. | 0.682 |
SFG48584.1 | SFG65752.1 | SAMN05660649_01799 | SAMN05660649_02324 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Uridine kinase. | 0.702 |
SFG48584.1 | SFH06543.1 | SAMN05660649_01799 | SAMN05660649_03704 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Copper amine oxidase N-terminal domain-containing protein. | 0.682 |
SFG48584.1 | SFH06570.1 | SAMN05660649_01799 | SAMN05660649_03706 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Copper amine oxidase N-terminal domain-containing protein. | 0.682 |
SFG48584.1 | cinA | SAMN05660649_01799 | SAMN05660649_04420 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.937 |
SFG48584.1 | guaA | SAMN05660649_01799 | SAMN05660649_00236 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.451 |
SFG48584.1 | guaB | SAMN05660649_01799 | SAMN05660649_01776 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.559 |
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