STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG23534.1Transcriptional regulator, TetR family. (205 aa)    
Predicted Functional Partners:
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
    
 0.733
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.679
SFG15575.1
ABC-2 type transport system permease protein.
 
     0.498
SFG54474.1
Transcriptional regulator, TetR family.
  
     0.496
SFG15603.1
ABC-2 type transport system permease protein.
 
     0.474
SFG15655.1
HlyD family secretion protein.
 
     0.458
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.457
SFH07394.1
Predicted ATPase.
    
 
 0.442
SFH12161.1
Predicted ATPase.
    
 
 0.442
SFG23552.1
Putative sterol carrier protein.
       0.428
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.