STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG23905.1Predicted metal-binding protein. (181 aa)    
Predicted Functional Partners:
SFG23879.1
Von Willebrand factor type A domain-containing protein.
 
     0.725
SFG23934.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.695
SFG23858.1
Nitric oxide reductase NorQ protein.
       0.662
SFG23836.1
GTPase, G3E family.
 
     0.630
SFH04268.1
Methylamine methyltransferase corrinoid protein reductive activase.
 
     0.598
SFG24009.1
Tetrahydromethanopterin S-methyltransferase subunit H.
 
     0.555
SFG24129.1
Hypothetical protein.
 
     0.540
SFG23988.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
     0.505
SFG24061.1
[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.492
SFG23956.1
Methyltransferase cognate corrinoid proteins.
       0.437
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.