STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG25165.1Protein of unknown function. (126 aa)    
Predicted Functional Partners:
SFG25144.1
Uncharacterized membrane protein YcaP, DUF421 family.
 
     0.949
SFG35858.1
Hypothetical protein.
  
     0.708
SFH35174.1
Putative sporulation protein YtxC.
  
    0.684
SFG25122.1
Starch phosphorylase.
       0.682
SFG65752.1
Uridine kinase.
 
     0.554
SFG66418.1
Putative ABC-transporter type IV.
  
     0.549
SFG94511.1
Hypothetical protein.
  
     0.545
SFH31685.1
Putative zinc-finger.
  
     0.498
SFG87796.1
Germination protein YpeB.
  
     0.489
SFH12393.1
Protein of unknown function.
  
     0.476
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.