STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG27986.1PAS domain S-box-containing protein. (491 aa)    
Predicted Functional Partners:
SFG87523.1
Two-component system, response regulator, stage 0 sporulation protein F.
  
  
  0.961
SFF98734.1
Two-component system, response regulator, stage 0 sporulation protein F.
 
 0.930
SFF93871.1
Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
  
  0.923
SFG75550.1
Signal transduction histidine kinase.
 
 0.870
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.856
SFH07394.1
Predicted ATPase.
  
 0.851
SFH39067.1
PAS domain S-box-containing protein.
 
 0.851
SFG55536.1
Response regulator receiver domain-containing protein.
 
 0.810
SFH12161.1
Predicted ATPase.
 
0.777
SFG72061.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
 0.751
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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