STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG28363.1Putative transposase. (410 aa)    
Predicted Functional Partners:
SFG28341.1
Transposase IS200 like.
 
  
 0.870
SFH21818.1
Hypothetical protein.
    
   0.765
SFH25028.1
AAA domain-containing protein, putative AbiEii toxin, Type IV TA system.
  
     0.746
SFG64210.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.717
SFH21834.1
Integrase core domain-containing protein.
    
   0.709
SFG94326.1
Repeat domain-containing protein.
  
     0.682
SFG28383.1
Hypothetical protein.
  
    0.667
SFG37668.1
Probable transposase.
  
     0.641
SFH08533.1
Transposase, IS605 OrfB family, central region.
  
     0.608
SFG82780.1
Protein of unknown function.
  
     0.599
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.