STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG29809.1Cysteine desulfurase family protein. (389 aa)    
Predicted Functional Partners:
SFH37787.1
Nitrogen fixation protein NifU.
  
 0.975
SFG98286.1
Nitrogen fixation protein NifU.
  
 0.974
SFF99910.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.860
SFG29763.1
Aldehyde oxidoreductase.
 
  
 0.859
SFG29785.1
tRNA 2-thiouridine synthesizing protein E.
       0.772
SFG62445.1
Cysteine desulfurase.
 
  
0.736
selD-2
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
  
 0.714
SFG63327.1
Thioredoxin reductase (NADPH).
 
 
 0.710
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
  
 0.707
SFG29706.1
Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
    
 0.662
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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