Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF94076.1 | SFG38161.1 | SAMN05660649_00107 | SAMN05660649_01499 | Peptidase T-like protein. | Xaa-Pro dipeptidase. | 0.683 |
SFF94076.1 | guaB | SAMN05660649_00107 | SAMN05660649_01776 | Peptidase T-like protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.810 |
SFG21281.1 | SFG38161.1 | SAMN05660649_00980 | SAMN05660649_01499 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Xaa-Pro dipeptidase. | 0.691 |
SFG21281.1 | SFG40762.1 | SAMN05660649_00980 | SAMN05660649_01595 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.625 |
SFG21281.1 | SFG72613.1 | SAMN05660649_00980 | SAMN05660649_02525 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.632 |
SFG21281.1 | guaB | SAMN05660649_00980 | SAMN05660649_01776 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.434 |
SFG37996.1 | SFG38021.1 | SAMN05660649_01493 | SAMN05660649_01494 | Peptide/nickel transport system permease protein. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.998 |
SFG37996.1 | SFG38161.1 | SAMN05660649_01493 | SAMN05660649_01499 | Peptide/nickel transport system permease protein. | Xaa-Pro dipeptidase. | 0.495 |
SFG38021.1 | SFG37996.1 | SAMN05660649_01494 | SAMN05660649_01493 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide/nickel transport system permease protein. | 0.998 |
SFG38021.1 | SFG38161.1 | SAMN05660649_01494 | SAMN05660649_01499 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Xaa-Pro dipeptidase. | 0.487 |
SFG38161.1 | SFF94076.1 | SAMN05660649_01499 | SAMN05660649_00107 | Xaa-Pro dipeptidase. | Peptidase T-like protein. | 0.683 |
SFG38161.1 | SFG21281.1 | SAMN05660649_01499 | SAMN05660649_00980 | Xaa-Pro dipeptidase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.691 |
SFG38161.1 | SFG37996.1 | SAMN05660649_01499 | SAMN05660649_01493 | Xaa-Pro dipeptidase. | Peptide/nickel transport system permease protein. | 0.495 |
SFG38161.1 | SFG38021.1 | SAMN05660649_01499 | SAMN05660649_01494 | Xaa-Pro dipeptidase. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.487 |
SFG38161.1 | SFG38188.1 | SAMN05660649_01499 | SAMN05660649_01500 | Xaa-Pro dipeptidase. | Cupin domain-containing protein. | 0.596 |
SFG38161.1 | SFG40762.1 | SAMN05660649_01499 | SAMN05660649_01595 | Xaa-Pro dipeptidase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.691 |
SFG38161.1 | SFG72613.1 | SAMN05660649_01499 | SAMN05660649_02525 | Xaa-Pro dipeptidase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.474 |
SFG38161.1 | SFH26060.1 | SAMN05660649_01499 | SAMN05660649_04483 | Xaa-Pro dipeptidase. | Zinc carboxypeptidase. | 0.506 |
SFG38161.1 | aroQ | SAMN05660649_01499 | SAMN05660649_00060 | Xaa-Pro dipeptidase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.597 |
SFG38161.1 | guaB | SAMN05660649_01499 | SAMN05660649_01776 | Xaa-Pro dipeptidase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.805 |
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