STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG38473.1Phage shock protein A (PspA) family protein. (239 aa)    
Predicted Functional Partners:
SFG77832.1
Phage shock protein C (PspC) family protein.
  
 
 0.978
SFH07394.1
Predicted ATPase.
 
 
 
 0.915
SFH12161.1
Predicted ATPase.
 
 
 
 0.912
SFG38442.1
Cell wall-active antibiotics response 4TMS YvqF.
 
  
 0.901
SFG38500.1
Hypothetical protein.
  
  
 0.825
SFH03553.1
Predicted ATPase.
 
 
 
 0.806
SFH39067.1
PAS domain S-box-containing protein.
    
 
 0.800
SFG38413.1
Two-component system, NarL family, sensor histidine kinase LiaS.
 
  
 0.777
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 
 0.770
SFH29779.1
Flotillin.
 
  
 0.736
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.