STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG39161.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
SFF96368.1
Flagellar motor switch protein FliN/FliY.
    
 
 0.873
SFG39133.1
Putative zinc-finger.
       0.726
SFF95705.1
Flagellar protein FliS.
    
 
 0.706
SFG39106.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.686
SFF96044.1
Flagellar motor switch protein FliN/FliY.
    
   0.684
SFF96314.1
Chemotaxis protein CheC.
    
   0.684
SFG39186.1
Membrane protein DedA, SNARE-associated domain.
  
    0.611
SFG58614.1
Tetratricopeptide repeat-containing protein.
 
   
 0.451
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.