Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF95765.1 | SFG41339.1 | SAMN05660649_00199 | SAMN05660649_01620 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | Tyrosine lyase ThiH. | 0.786 |
SFF95765.1 | SFG70209.1 | SAMN05660649_00199 | SAMN05660649_02420 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | Iron-only hydrogenase maturation protein HydG. | 0.786 |
SFF95765.1 | SFH07394.1 | SAMN05660649_00199 | SAMN05660649_03763 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | Predicted ATPase. | 0.885 |
SFF95765.1 | SFH12161.1 | SAMN05660649_00199 | SAMN05660649_03941 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | Predicted ATPase. | 0.885 |
SFG41296.1 | SFG41339.1 | SAMN05660649_01618 | SAMN05660649_01620 | Sulfur carrier protein. | Tyrosine lyase ThiH. | 0.975 |
SFG41296.1 | SFG70209.1 | SAMN05660649_01618 | SAMN05660649_02420 | Sulfur carrier protein. | Iron-only hydrogenase maturation protein HydG. | 0.840 |
SFG41296.1 | thiC | SAMN05660649_01618 | SAMN05660649_04100 | Sulfur carrier protein. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.803 |
SFG41296.1 | thiE | SAMN05660649_01618 | SAMN05660649_01051 | Sulfur carrier protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.916 |
SFG41296.1 | thiE-2 | SAMN05660649_01618 | SAMN05660649_01621 | Sulfur carrier protein. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.978 |
SFG41296.1 | thiG | SAMN05660649_01618 | SAMN05660649_01619 | Sulfur carrier protein. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
SFG41339.1 | SFF95765.1 | SAMN05660649_01620 | SAMN05660649_00199 | Tyrosine lyase ThiH. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.786 |
SFG41339.1 | SFG41296.1 | SAMN05660649_01620 | SAMN05660649_01618 | Tyrosine lyase ThiH. | Sulfur carrier protein. | 0.975 |
SFG41339.1 | SFG70167.1 | SAMN05660649_01620 | SAMN05660649_02418 | Tyrosine lyase ThiH. | [FeFe] hydrogenase H-cluster maturation GTPase HydF. | 0.791 |
SFG41339.1 | SFG70209.1 | SAMN05660649_01620 | SAMN05660649_02420 | Tyrosine lyase ThiH. | Iron-only hydrogenase maturation protein HydG. | 0.875 |
SFG41339.1 | SFH07394.1 | SAMN05660649_01620 | SAMN05660649_03763 | Tyrosine lyase ThiH. | Predicted ATPase. | 0.794 |
SFG41339.1 | SFH12161.1 | SAMN05660649_01620 | SAMN05660649_03941 | Tyrosine lyase ThiH. | Predicted ATPase. | 0.794 |
SFG41339.1 | thiC | SAMN05660649_01620 | SAMN05660649_04100 | Tyrosine lyase ThiH. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.797 |
SFG41339.1 | thiE | SAMN05660649_01620 | SAMN05660649_01051 | Tyrosine lyase ThiH. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.765 |
SFG41339.1 | thiE-2 | SAMN05660649_01620 | SAMN05660649_01621 | Tyrosine lyase ThiH. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.958 |
SFG41339.1 | thiG | SAMN05660649_01620 | SAMN05660649_01619 | Tyrosine lyase ThiH. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
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