STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG46369.1Two-component system, CitB family, response regulator DctR. (230 aa)    
Predicted Functional Partners:
SFG46392.1
Two-component system, CitB family, sensor histidine kinase DctS.
 0.997
SFG15343.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
 0.930
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.918
SFG35660.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
 0.895
SFG22114.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
 0.888
SFG46349.1
C4-dicarboxylate-binding protein DctP.
 
   
 0.827
SFH07394.1
Predicted ATPase.
    
 0.826
SFH12161.1
Predicted ATPase.
    
 0.826
SFG65226.1
Two-component system, CitB family, response regulator DctR.
  
  
 
0.817
SFG75550.1
Signal transduction histidine kinase.
 
  
 0.762
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.