STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG50764.1Glyoxylase, beta-lactamase superfamily II. (315 aa)    
Predicted Functional Partners:
SFG79217.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.976
SFF93238.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.940
SFH18450.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.940
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
   
 0.905
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.881
SFH09372.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.859
SFG50743.1
UDP-N-acetylmuramyl tripeptide synthase.
       0.767
SFG50714.1
Hypothetical protein.
       0.757
rsmH
16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
 
 
   0.732
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.730
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.