Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG01835.1 | SFG38091.1 | SAMN05660649_00493 | SAMN05660649_01497 | uroporphyrinogen-III synthase. | Nitroreductase. | 0.720 |
SFG01835.1 | SFG49479.1 | SAMN05660649_00493 | SAMN05660649_01829 | uroporphyrinogen-III synthase. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.707 |
SFG01835.1 | SFG54640.1 | SAMN05660649_00493 | SAMN05660649_01936 | uroporphyrinogen-III synthase. | Nitroreductase. | 0.720 |
SFG01835.1 | SFG78852.1 | SAMN05660649_00493 | SAMN05660649_02728 | uroporphyrinogen-III synthase. | Nitroreductase. | 0.731 |
SFG01835.1 | SFH09391.1 | SAMN05660649_00493 | SAMN05660649_03824 | uroporphyrinogen-III synthase. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.698 |
SFG01835.1 | SFH09411.1 | SAMN05660649_00493 | SAMN05660649_03825 | uroporphyrinogen-III synthase. | Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.571 |
SFG01835.1 | SFH09429.1 | SAMN05660649_00493 | SAMN05660649_03826 | uroporphyrinogen-III synthase. | Nitroreductase. | 0.874 |
SFG01835.1 | birA | SAMN05660649_00493 | SAMN05660649_03843 | uroporphyrinogen-III synthase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.622 |
SFG22090.1 | SFG38091.1 | SAMN05660649_01011 | SAMN05660649_01497 | Hypothetical protein. | Nitroreductase. | 0.513 |
SFG22090.1 | SFG54640.1 | SAMN05660649_01011 | SAMN05660649_01936 | Hypothetical protein. | Nitroreductase. | 0.513 |
SFG22090.1 | SFG78852.1 | SAMN05660649_01011 | SAMN05660649_02728 | Hypothetical protein. | Nitroreductase. | 0.520 |
SFG22090.1 | SFH09429.1 | SAMN05660649_01011 | SAMN05660649_03826 | Hypothetical protein. | Nitroreductase. | 0.527 |
SFG38091.1 | SFG01835.1 | SAMN05660649_01497 | SAMN05660649_00493 | Nitroreductase. | uroporphyrinogen-III synthase. | 0.720 |
SFG38091.1 | SFG22090.1 | SAMN05660649_01497 | SAMN05660649_01011 | Nitroreductase. | Hypothetical protein. | 0.513 |
SFG38091.1 | SFG49479.1 | SAMN05660649_01497 | SAMN05660649_01829 | Nitroreductase. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.616 |
SFG38091.1 | SFG54640.1 | SAMN05660649_01497 | SAMN05660649_01936 | Nitroreductase. | Nitroreductase. | 0.686 |
SFG38091.1 | SFH09391.1 | SAMN05660649_01497 | SAMN05660649_03824 | Nitroreductase. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.670 |
SFG38091.1 | SFH09411.1 | SAMN05660649_01497 | SAMN05660649_03825 | Nitroreductase. | Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.549 |
SFG38091.1 | birA | SAMN05660649_01497 | SAMN05660649_03843 | Nitroreductase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.692 |
SFG49479.1 | SFG01835.1 | SAMN05660649_01829 | SAMN05660649_00493 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | uroporphyrinogen-III synthase. | 0.707 |
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