STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG54909.1Putative ABC transport system ATP-binding protein. (232 aa)    
Predicted Functional Partners:
SFG54885.1
Putative ABC transport system permease protein.
 
 0.993
SFG08984.1
Putative ABC transport system permease protein.
 
 0.992
SFG72861.1
Putative ABC transport system permease protein.
 0.987
SFF93056.1
Putative ABC transport system permease protein.
 0.986
SFG41130.1
Putative ABC transport system permease protein.
 0.986
SFG35195.1
Putative ABC transport system permease protein.
 
 0.972
SFG62910.1
Putative ABC transport system permease protein.
 
 0.945
SFG57778.1
Nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.905
SFG22780.1
Putative ABC transport system permease protein.
 
 0.904
SFG38042.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.899
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.