STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG55964.1ABC-2 type transport system ATP-binding protein. (308 aa)    
Predicted Functional Partners:
SFG55939.1
ABC-2 family transporter protein.
 
 0.991
SFG71102.1
ABC-2 type transport system permease protein.
 
 0.961
SFG55989.1
Hypothetical protein.
 
    0.928
SFG55916.1
Hypothetical protein.
 
     0.921
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.920
SFG95482.1
Energy-coupling factor transport system ATP-binding protein.
 
  
 
0.883
SFF98887.1
ABC-2 family transporter protein.
  
 0.840
SFG55819.1
Putative glutamine amidotransferase.
 
     0.838
SFG55841.1
Aerotolerance regulator N-terminal.
 
     0.824
SFG55862.1
Protein of unknown function DUF58.
 
     0.784
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.