STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG56905.1Cadherin-like beta sandwich domain-containing protein. (3953 aa)    
Predicted Functional Partners:
SFG06678.1
Listeria/Bacterioides repeat-containing protein.
  
  
0.886
SFG82321.1
S-layer homology domain-containing protein.
  
  
0.886
SFG63283.1
Hypothetical protein.
   
   0.830
SFG83448.1
MacB-like core domain-containing protein.
 
 
   0.786
SFG10566.1
Sirohydrochlorin ferrochelatase.
 
     0.778
SFG94326.1
Repeat domain-containing protein.
  
    0.772
SFH41658.1
Hypothetical protein.
  
     0.769
SFH14773.1
Bla regulator protein blaR1.
 
  
 0.764
SFG37555.1
CRISPR-associated (Cas) DxTHG family protein.
  
     0.748
SFG06200.1
Hypothetical protein.
  
     0.742
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.