STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG57215.1Protein of unknown function. (434 aa)    
Predicted Functional Partners:
SFG57192.1
Hypothetical protein.
 
     0.944
SFG57070.1
N-terminal double-transmembrane domain-containing protein.
 
     0.940
SFG57040.1
Putative glutamine amidotransferase.
 
     0.908
SFG57000.1
Prenyltransferase and squalene oxidase repeat-containing protein.
 
     0.892
SFG57094.1
Protein of unknown function DUF58.
 
     0.857
SFG24511.1
Squalene-hopene cyclase C-terminal domain-containing protein.
 
     0.789
SFG57119.1
MoxR-like ATPase.
 
     0.780
SFG57166.1
Hypothetical protein.
       0.769
SFG57140.1
Hypothetical protein.
       0.767
SFG56721.1
Energy-coupling factor transport system substrate-specific component.
 
     0.764
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.