STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG58103.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (198 aa)    
Predicted Functional Partners:
SFH00238.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
     0.666
SFG47798.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 
  0.635
SFH25189.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
     0.615
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
 
 0.610
SFG58124.1
FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
       0.595
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.567
SFG72209.1
Uracil phosphoribosyltransferase; Belongs to the UPRTase family.
  
  
  0.538
SFG15496.1
Cobaltochelatase CobN.
  
  
  0.518
SFG49479.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.440
SFH09372.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.436
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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