STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG61670.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (330 aa)    
Predicted Functional Partners:
SFG45697.1
Galactose-1-phosphate uridylyltransferase.
  
 0.972
SFG97761.1
Hypothetical protein.
  
 0.957
SFH06918.1
UDP-galactopyranose mutase.
    
 0.928
SFG22826.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.857
SFH07251.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.855
SFG35093.1
Nucleotidyl transferase.
 
 0.851
SFG89373.1
UDP-glucose 4-epimerase.
  
0.833
SFF97039.1
Nucleotidyltransferase.
  
 0.819
SFF95742.1
Flagellar protein FlaG.
    
   0.784
SFH06758.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.760
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.