STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG63305.1Di-and tricarboxylate transporter. (448 aa)    
Predicted Functional Partners:
SFG63372.1
Arylsulfotransferase (ASST).
 
     0.852
SFG63327.1
Thioredoxin reductase (NADPH).
 
     0.745
SFG07970.1
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
  
     0.696
SFG26913.1
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
  
     0.659
SFG63349.1
Thioredoxin.
       0.592
SFG63283.1
Hypothetical protein.
     
 0.487
SFG89471.1
Predicted nucleotidyltransferase.
  
     0.457
SFG08569.1
Anion transporter.
  
   
 0.427
SFG63417.1
Cyclic nucleotide-binding domain-containing protein.
  
   0.401
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.