STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG69209.1Hydrogenase nickel incorporation protein HypB. (216 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.989
SFG69160.1
Hydrogenase maturation protein HypD.
 
  
 0.986
SFG69184.1
Hydrogenase expression/formation protein HypC.
 
  
 0.967
hypA-2
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.965
SFG69138.1
Hydrogenase maturation protein, carbamoyl dehydratase HypE.
 
  
 0.955
SFG69118.1
Hydrogenase maturation protein HypF.
 
   
 0.954
SFH28068.1
Hydrogenase maturation protein HypC.
 
  
 0.875
SFH27998.1
Ech hydrogenase subunit E.
   
 
 0.818
SFG77736.1
Iron only hydrogenase large subunit, C-terminal domain.
  
    0.814
SFH18024.1
Phosphosulfolactate synthase.
  
    0.809
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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