STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG69998.1Ni/Fe-hydrogenase 2 integral membrane subunit HybB. (394 aa)    
Predicted Functional Partners:
SFG70024.1
Formate dehydrogenase iron-sulfur subunit.
 0.996
SFG58429.1
Formate dehydrogenase iron-sulfur subunit.
 0.989
SFG58448.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.964
SFG22891.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
 
 0.953
SFF98213.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
 
 0.950
SFG58471.1
Formate dehydrogenase major subunit.
 
 0.946
SFH02717.1
Fe-S-cluster-containing hydrogenase component 2.
  
 0.940
SFH30107.1
Molydopterin dinucleotide binding domain-containing protein.
 
 0.930
SFH30132.1
Molybdopterin oxidoreductase.
 
 0.928
SFH30120.1
Molybdopterin oxidoreductase.
  
 0.918
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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