STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG71711.1Trk system potassium uptake protein TrkA; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (605 aa)    
Predicted Functional Partners:
SFG25213.1
Trk system potassium uptake protein TrkH.
  
 
 0.931
SFG72463.1
Trk system potassium uptake protein TrkH.
  
 
 0.931
SFG83669.1
Ca2+-transporting ATPase.
  
 
 0.858
SFF95986.1
Flagellar hook protein FlgE.
    
   0.832
SFF96005.1
Flagella basal body rod protein.
    
   0.832
SFF96248.1
Flagellar basal-body rod protein FlgG.
    
   0.832
SFF96264.1
Flagellar basal-body rod protein FlgG.
    
   0.832
SFG70621.1
NAD(P)H dehydrogenase (quinone).
  
 
 0.830
SFG36680.1
NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.814
SFG48584.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.769
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.