STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG72061.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (484 aa)    
Predicted Functional Partners:
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.992
SFH07394.1
Predicted ATPase.
 
 0.970
SFH12161.1
Predicted ATPase.
  
 0.970
SFG72084.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.969
SFG09552.1
PAS domain S-box-containing protein.
 0.962
SFF96368.1
Flagellar motor switch protein FliN/FliY.
  
 
 0.936
SFG75550.1
Signal transduction histidine kinase.
 
 0.912
SFH29191.1
PAS domain S-box-containing protein.
 
 0.908
SFH39067.1
PAS domain S-box-containing protein.
 
 0.859
SFG64919.1
Two-component system, NtrC family, sensor histidine kinase AtoS.
 
 0.834
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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