STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG72331.1Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (439 aa)    
Predicted Functional Partners:
SFG40854.1
GXGXG motif-containing protein.
  
 0.974
SFF93602.1
Glutamate synthase (NADPH/NADH) small chain.
  
 0.932
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
   
 0.898
SFH09411.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.895
SFH18490.1
Biotin-requiring enzyme.
  
 
 0.867
SFH18511.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.867
SFH18528.1
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
  
 
 0.867
SFH09372.1
Malonyl CoA-acyl carrier protein transacylase.
    
 0.863
SFG16699.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.848
SFG71961.1
Heterodisulfide reductase subunit A.
  
 0.827
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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