STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG72549.1LysM domain-containing protein. (111 aa)    
Predicted Functional Partners:
SFG72526.1
DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase.
       0.572
addA
DNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase.
       0.548
SFG28951.1
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
     0.535
SFF95167.1
LysM domain-containing protein.
 
   
 0.530
SFG87796.1
Germination protein YpeB.
  
  
 0.528
SFG75618.1
Spore germination protein KB.
  
     0.519
SFH11814.1
Spore germination protein KB.
  
     0.513
SFG75875.1
Spore germination protein (amino acid permease).
  
     0.508
SFG07822.1
LysM domain-containing protein.
  
     0.447
SFG62328.1
Glucokinase.
    
  0.422
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.