Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFF93387.1 | SFG28951.1 | SAMN05660649_00071 | SAMN05660649_01289 | Stage III sporulation protein AE. | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.777 |
| SFF93387.1 | SFG39344.1 | SAMN05660649_00071 | SAMN05660649_01542 | Stage III sporulation protein AE. | Sporulation integral membrane protein YlbJ. | 0.781 |
| SFF93387.1 | SFG75618.1 | SAMN05660649_00071 | SAMN05660649_02579 | Stage III sporulation protein AE. | Spore germination protein KB. | 0.719 |
| SFF93387.1 | SFG75853.1 | SAMN05660649_00071 | SAMN05660649_02591 | Stage III sporulation protein AE. | Spore germination protein KA. | 0.762 |
| SFF93387.1 | SFG75875.1 | SAMN05660649_00071 | SAMN05660649_02592 | Stage III sporulation protein AE. | Spore germination protein (amino acid permease). | 0.700 |
| SFF93387.1 | SFG75892.1 | SAMN05660649_00071 | SAMN05660649_02593 | Stage III sporulation protein AE. | Spore germination B3/ GerAC like, C-terminal. | 0.631 |
| SFF93387.1 | SFG87796.1 | SAMN05660649_00071 | SAMN05660649_02981 | Stage III sporulation protein AE. | Germination protein YpeB. | 0.682 |
| SFF93387.1 | SFH11798.1 | SAMN05660649_00071 | SAMN05660649_03921 | Stage III sporulation protein AE. | Spore germination protein KA. | 0.754 |
| SFF93387.1 | SFH11814.1 | SAMN05660649_00071 | SAMN05660649_03922 | Stage III sporulation protein AE. | Spore germination protein KB. | 0.731 |
| SFG28951.1 | SFF93387.1 | SAMN05660649_01289 | SAMN05660649_00071 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein AE. | 0.777 |
| SFG28951.1 | SFG39344.1 | SAMN05660649_01289 | SAMN05660649_01542 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation integral membrane protein YlbJ. | 0.797 |
| SFG28951.1 | SFG75618.1 | SAMN05660649_01289 | SAMN05660649_02579 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KB. | 0.745 |
| SFG28951.1 | SFG75853.1 | SAMN05660649_01289 | SAMN05660649_02591 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KA. | 0.748 |
| SFG28951.1 | SFG75875.1 | SAMN05660649_01289 | SAMN05660649_02592 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein (amino acid permease). | 0.733 |
| SFG28951.1 | SFG75892.1 | SAMN05660649_01289 | SAMN05660649_02593 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination B3/ GerAC like, C-terminal. | 0.662 |
| SFG28951.1 | SFG87796.1 | SAMN05660649_01289 | SAMN05660649_02981 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Germination protein YpeB. | 0.765 |
| SFG28951.1 | SFH11798.1 | SAMN05660649_01289 | SAMN05660649_03921 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KA. | 0.746 |
| SFG28951.1 | SFH11814.1 | SAMN05660649_01289 | SAMN05660649_03922 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Spore germination protein KB. | 0.739 |
| SFG39344.1 | SFF93387.1 | SAMN05660649_01542 | SAMN05660649_00071 | Sporulation integral membrane protein YlbJ. | Stage III sporulation protein AE. | 0.781 |
| SFG39344.1 | SFG28951.1 | SAMN05660649_01542 | SAMN05660649_01289 | Sporulation integral membrane protein YlbJ. | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.797 |
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