STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG76512.1Penicillin-binding protein 2. (935 aa)    
Predicted Functional Partners:
SFG76470.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.988
rodA
Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.973
SFG27867.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.945
SFG84907.1
Penicillin-binding protein 2A.
 
 
 0.944
SFG76454.1
Rod shape-determining protein MreB.
 
 0.937
SFH26029.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
 
 
 0.914
SFG28780.1
Cell division protein FtsQ; Essential cell division protein.
  
 
 0.903
SFH35988.1
Penicillin-binding protein 2.
  
  
0.901
SFG48715.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
 
 0.893
SFG36848.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
 0.891
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.