Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG78852.1 | SFG78876.1 | SAMN05660649_02728 | SAMN05660649_02729 | Nitroreductase. | Protein of unknown function. | 0.415 |
SFG78852.1 | SFG78898.1 | SAMN05660649_02728 | SAMN05660649_02730 | Nitroreductase. | Hypothetical protein. | 0.563 |
SFG78852.1 | SFG83669.1 | SAMN05660649_02728 | SAMN05660649_02873 | Nitroreductase. | Ca2+-transporting ATPase. | 0.400 |
SFG78852.1 | SFH09391.1 | SAMN05660649_02728 | SAMN05660649_03824 | Nitroreductase. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.939 |
SFG78876.1 | SFG78852.1 | SAMN05660649_02729 | SAMN05660649_02728 | Protein of unknown function. | Nitroreductase. | 0.415 |
SFG78876.1 | SFG78898.1 | SAMN05660649_02729 | SAMN05660649_02730 | Protein of unknown function. | Hypothetical protein. | 0.678 |
SFG78898.1 | SFG78852.1 | SAMN05660649_02730 | SAMN05660649_02728 | Hypothetical protein. | Nitroreductase. | 0.563 |
SFG78898.1 | SFG78876.1 | SAMN05660649_02730 | SAMN05660649_02729 | Hypothetical protein. | Protein of unknown function. | 0.678 |
SFG78898.1 | SFG78924.1 | SAMN05660649_02730 | SAMN05660649_02731 | Hypothetical protein. | Hypothetical protein. | 0.402 |
SFG78898.1 | SFG83669.1 | SAMN05660649_02730 | SAMN05660649_02873 | Hypothetical protein. | Ca2+-transporting ATPase. | 0.406 |
SFG78898.1 | SFH09391.1 | SAMN05660649_02730 | SAMN05660649_03824 | Hypothetical protein. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.449 |
SFG78898.1 | pdxS | SAMN05660649_02730 | SAMN05660649_03337 | Hypothetical protein. | Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.416 |
SFG78898.1 | pdxT | SAMN05660649_02730 | SAMN05660649_03338 | Hypothetical protein. | Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.427 |
SFG78924.1 | SFG78898.1 | SAMN05660649_02731 | SAMN05660649_02730 | Hypothetical protein. | Hypothetical protein. | 0.402 |
SFG78924.1 | SFH09391.1 | SAMN05660649_02731 | SAMN05660649_03824 | Hypothetical protein. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.788 |
SFG83669.1 | SFG78852.1 | SAMN05660649_02873 | SAMN05660649_02728 | Ca2+-transporting ATPase. | Nitroreductase. | 0.400 |
SFG83669.1 | SFG78898.1 | SAMN05660649_02873 | SAMN05660649_02730 | Ca2+-transporting ATPase. | Hypothetical protein. | 0.406 |
SFG83669.1 | SFH09391.1 | SAMN05660649_02873 | SAMN05660649_03824 | Ca2+-transporting ATPase. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.767 |
SFH09391.1 | SFG78852.1 | SAMN05660649_03824 | SAMN05660649_02728 | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Nitroreductase. | 0.939 |
SFH09391.1 | SFG78898.1 | SAMN05660649_03824 | SAMN05660649_02730 | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | Hypothetical protein. | 0.449 |
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