STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG81268.1Putative ABC transport system ATP-binding protein. (199 aa)    
Predicted Functional Partners:
SFG81242.1
Putative ABC transport system permease protein.
 
  
 0.978
SFG81293.1
Calcineurin-like phosphoesterase superfamily domain-containing protein.
       0.773
SFG81320.1
Hypothetical protein.
       0.590
SFG88718.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
  
     0.576
SFG64841.1
Putative zinc-or iron-chelating domain-containing protein.
  
     0.559
SFG15628.1
ABC-2 type transport system ATP-binding protein.
  
     0.528
SFH32452.1
Uncharacterized conserved protein, DUF169 family.
  
     0.516
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.495
SFG48605.1
ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family.
  
     0.449
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
     0.430
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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