STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG81425.1Arsenite efflux pump ArsB, ACR3 family. (328 aa)    
Predicted Functional Partners:
SFG87110.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.595
SFH00392.1
Hypothetical protein.
  
  
 0.595
SFH25462.1
Transcriptional regulator, ArsR family.
 
  
 0.539
SFG81632.1
Regulatory protein, arsR family.
 
  
 0.531
SFG81455.1
Hypothetical protein.
       0.505
SFG81347.1
Transcriptional regulator, ArsR family.
  
  
 0.451
SFG35512.1
Hypothetical protein.
 
   
 0.432
SFG29234.1
Arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1).
     
 0.408
SFG79217.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
     
 0.405
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.