STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG83502.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (290 aa)    
Predicted Functional Partners:
SFG83426.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.999
SFG83484.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.999
SFG83410.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.998
SFH10433.1
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.991
SFG54106.1
Multiple sugar transport system substrate-binding protein.
  
 0.990
SFG83989.1
Tungstate transport system ATP-binding protein.
  
 0.985
SFG83466.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
 
    0.839
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.771
SFG83448.1
MacB-like core domain-containing protein.
 
    0.764
SFG93172.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.739
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.