STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG84037.1Ubiquinone biosynthesis protein. (545 aa)    
Predicted Functional Partners:
SFH06904.1
Protein of unknown function.
   
 
 0.690
SFG01872.1
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.668
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
    
 0.640
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 
 0.602
SFG71689.1
Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
  0.593
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
   
 
 0.580
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
 
   
  0.579
SFH06745.1
TPR repeat-containing protein.
  
 
 0.573
SFG89233.1
O-antigen ligase.
   
 
 0.552
SFG84062.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
 0.540
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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