Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG22341.1 | SFG22433.1 | SAMN05660649_01021 | SAMN05660649_01025 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase. | 0.711 |
SFG22341.1 | SFG22458.1 | SAMN05660649_01021 | SAMN05660649_01026 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.840 |
SFG22341.1 | SFG22511.1 | SAMN05660649_01021 | SAMN05660649_01028 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.783 |
SFG22341.1 | SFG89825.1 | SAMN05660649_01021 | SAMN05660649_03078 | Hypothetical protein. | Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.702 |
SFG22341.1 | SFG89870.1 | SAMN05660649_01021 | SAMN05660649_03081 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.777 |
SFG22341.1 | SFG89888.1 | SAMN05660649_01021 | SAMN05660649_03082 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.809 |
SFG22341.1 | SFG89905.1 | SAMN05660649_01021 | SAMN05660649_03083 | Hypothetical protein. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.546 |
SFG22341.1 | SFG89922.1 | SAMN05660649_01021 | SAMN05660649_03084 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase. | 0.554 |
SFG22433.1 | SFG22341.1 | SAMN05660649_01025 | SAMN05660649_01021 | Glucose-1-phosphate thymidylyltransferase. | Hypothetical protein. | 0.711 |
SFG22433.1 | SFG22458.1 | SAMN05660649_01025 | SAMN05660649_01026 | Glucose-1-phosphate thymidylyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.997 |
SFG22433.1 | SFG22511.1 | SAMN05660649_01025 | SAMN05660649_01028 | Glucose-1-phosphate thymidylyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.974 |
SFG22433.1 | SFG89825.1 | SAMN05660649_01025 | SAMN05660649_03078 | Glucose-1-phosphate thymidylyltransferase. | Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.783 |
SFG22433.1 | SFG89855.1 | SAMN05660649_01025 | SAMN05660649_03080 | Glucose-1-phosphate thymidylyltransferase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.495 |
SFG22433.1 | SFG89870.1 | SAMN05660649_01025 | SAMN05660649_03081 | Glucose-1-phosphate thymidylyltransferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.991 |
SFG22433.1 | SFG89888.1 | SAMN05660649_01025 | SAMN05660649_03082 | Glucose-1-phosphate thymidylyltransferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.945 |
SFG22433.1 | SFG89905.1 | SAMN05660649_01025 | SAMN05660649_03083 | Glucose-1-phosphate thymidylyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.904 |
SFG22433.1 | fcl | SAMN05660649_01025 | SAMN05660649_03073 | Glucose-1-phosphate thymidylyltransferase. | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. | 0.446 |
SFG22458.1 | SFG22341.1 | SAMN05660649_01026 | SAMN05660649_01021 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | Hypothetical protein. | 0.840 |
SFG22458.1 | SFG22433.1 | SAMN05660649_01026 | SAMN05660649_01025 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | Glucose-1-phosphate thymidylyltransferase. | 0.997 |
SFG22458.1 | SFG22511.1 | SAMN05660649_01026 | SAMN05660649_01028 | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.990 |
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